HVDR Online Tools

Hepatitis Virus Diversity Research Unit, University of the Witwatersrand

Mutation Reporter Tool Bell, T. G. and Kramvis, A. (2013) Mutation Reporter Tool: an online tool to interrogate loci of interest, with its utility demonstrated using hepatitis B virus. Virology Journal 10: 62.

Available online.
Fragment Merger Tool Bell, T. G. and Kramvis, A. (2013) Fragment Merger: An online tool to merge overlapping long sequence fragments. Viruses 5: 824-833.

Available online.
Deep Threshold Tool Yousif*, M., Bell*, T. G., Mudawi, H., Glebe, D. and Kramvis, A. (2014) Analysis of ultra-deep pyrosequencing and cloning based sequencing of the basic core promoter/precore/core region of hepatitis B virus using newly developed bioinformatics tools. PLoS ONE 9(4): e95377.

Available online.
Rosetta Tool
Small Genome Tools Bell, T. G. and Kramvis, A. (2015) Bioinformatics Tools for Small Genomes, such as Hepatitis B Virus. Viruses 7: 781-797.

Available online.
Book Chapter

The Study of Hepatitis B Virus using Bioinformatics
Bell, T. G. and Kramvis, A. (2016) The Study of Hepatitis B Virus using Bioinformatics. Bioinformatics - Updated Features and Applications, Abdurakhmonov, I. (Ed.), InTech, DOI: 10.5772/63076.

Available online (HTML and PDF).
Divergence Tool

Rafael Tool

•   Tools Index   •   Small Genome Tools Index   •   HBV Alignments   •   Book Chapter   •

• Please cite the paper describing the relevant tool if you use any results or output in a paper or presentation •

• All tools and data are provided without any warranty • Check all results carefully •

• Queries or comments to Dr Trevor Bell [Trevor.Bell (@) wits.ac.za] •

• Hand-coded in Emacs •


Last modified Thursday, 03-Aug-2017 14:17:29 SAST